Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AGAP10P-201ENST00000454844 2418 ntBASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 SAMD11P1-201ENST00000571429 661 ntBASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHMP6Q96FZ7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AC022145.2-201ENST00000598203 171 ntBASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AP3S2-216ENST00000617003 1561 ntBASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.97□□□□□ -0.01
CHMP6Q96FZ7 PCDHB18P-202ENST00000526308 3197 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms