Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 AC023090.2-201ENST00000625182 2110 ntBASIC10.61□□□□□ -0.71
UBE2D3P61077 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D3P61077 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D3P61077 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 LBH-203ENST00000404397 543 ntTSL 4 BASIC10.61□□□□□ -0.71
UBE2D3P61077 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D3P61077 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 DOC2GP-202ENST00000514950 1163 ntBASIC10.61□□□□□ -0.71
UBE2D3P61077 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D3P61077 RRP7BP-205ENST00000566851 833 ntBASIC10.61□□□□□ -0.71
UBE2D3P61077 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D3P61077 RPS15-202ENST00000585665 467 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D3P61077 AL662799.1-202ENST00000614205 422 ntBASIC10.61□□□□□ -0.71
UBE2D3P61077 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
UBE2D3P61077 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
UBE2D3P61077 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 AC055811.4-201ENST00000624039 1754 ntBASIC10.61□□□□□ -0.71
UBE2D3P61077 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D3P61077 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D3P61077 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D3P61077 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 OS9-206ENST00000435406 2346 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
UBE2D3P61077 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D3P61077 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
UBE2D3P61077 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
UBE2D3P61077 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.6□□□□□ -0.71
UBE2D3P61077 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
UBE2D3P61077 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
UBE2D3P61077 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
UBE2D3P61077 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.6□□□□□ -0.71
UBE2D3P61077 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.6□□□□□ -0.71
UBE2D3P61077 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.6□□□□□ -0.71
UBE2D3P61077 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
UBE2D3P61077 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 CICP16-201ENST00000502609 2813 ntBASIC10.6□□□□□ -0.71
UBE2D3P61077 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
UBE2D3P61077 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 AC015818.8-201ENST00000587907 1519 ntBASIC10.6□□□□□ -0.71
UBE2D3P61077 SLC9A3P3-201ENST00000457608 2229 ntBASIC10.6□□□□□ -0.71
UBE2D3P61077 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.6□□□□□ -0.71
UBE2D3P61077 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.6□□□□□ -0.71
UBE2D3P61077 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
UBE2D3P61077 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.6□□□□□ -0.71
UBE2D3P61077 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms