Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
PHF1O43189 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.92□□□□□ -0.34
PHF1O43189 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.92□□□□□ -0.34
PHF1O43189 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
PHF1O43189 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
PHF1O43189 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.91□□□□□ -0.34
PHF1O43189 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
PHF1O43189 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 ACTG1P3-201ENST00000431775 1114 ntBASIC12.91□□□□□ -0.34
PHF1O43189 AC006033.1-201ENST00000440505 426 ntBASIC12.91□□□□□ -0.34
PHF1O43189 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.91□□□□□ -0.34
PHF1O43189 RPL13AP20-201ENST00000459725 609 ntBASIC12.91□□□□□ -0.34
PHF1O43189 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.91□□□□□ -0.34
PHF1O43189 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 AC015910.1-201ENST00000579400 975 ntBASIC12.91□□□□□ -0.34
PHF1O43189 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PHF1O43189 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PHF1O43189 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.91□□□□□ -0.34
PHF1O43189 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PHF1O43189 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 AC005840.4-201ENST00000541242 2494 ntBASIC12.91□□□□□ -0.34
PHF1O43189 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.91□□□□□ -0.34
PHF1O43189 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.91□□□□□ -0.34
PHF1O43189 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PHF1O43189 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
PHF1O43189 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PHF1O43189 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PHF1O43189 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PHF1O43189 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.9□□□□□ -0.34
PHF1O43189 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PHF1O43189 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.9□□□□□ -0.34
PHF1O43189 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PHF1O43189 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms