Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.95□□□□□ -0.5
SRRM4A7MD48 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ENPP7P14-201ENST00000621765 1040 ntBASIC11.94□□□□□ -0.5
SRRM4A7MD48 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC215219.1-201ENST00000400706 1817 ntBASIC11.94□□□□□ -0.5
SRRM4A7MD48 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 RN7SL832P-201ENST00000607781 1756 ntBASIC11.94□□□□□ -0.5
SRRM4A7MD48 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.94□□□□□ -0.5
SRRM4A7MD48 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SRRM4A7MD48 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 FKBP4P6-201ENST00000457486 1332 ntBASIC11.93□□□□□ -0.5
SRRM4A7MD48 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SRRM4A7MD48 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.93□□□□□ -0.5
SRRM4A7MD48 AC106760.1-201ENST00000508690 800 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms