Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZNF880Q6PDB4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC138969.2-201ENST00000532739 9932 ntBASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC003102.2-201ENST00000589195 1469 ntBASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC005562.1-201ENST00000583030 3219 ntBASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SLC7A15P-201ENST00000424028 1363 ntBASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 DGCR9-201ENST00000609630 2415 ntBASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 KLF2P2-201ENST00000416807 1039 ntBASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZNF880Q6PDB4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ZNF880Q6PDB4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms