Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM4P67936 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM4P67936 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TPM4P67936 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TPM4P67936 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 HLA-K-203ENST00000430151 1046 ntBASIC16.7■□□□□ 0.26
TPM4P67936 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM4P67936 YBX1P5-201ENST00000509441 847 ntBASIC16.7■□□□□ 0.26
TPM4P67936 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM4P67936 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM4P67936 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM4P67936 TEX28P1-201ENST00000613479 1221 ntBASIC16.7■□□□□ 0.26
TPM4P67936 TEX28P2-201ENST00000617764 1221 ntBASIC16.7■□□□□ 0.26
TPM4P67936 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
TPM4P67936 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.7■□□□□ 0.26
TPM4P67936 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM4P67936 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 AL158070.2-201ENST00000623713 1621 ntBASIC16.7■□□□□ 0.26
TPM4P67936 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.7■□□□□ 0.26
TPM4P67936 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM4P67936 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TPM4P67936 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM4P67936 AC093525.8-201ENST00000624099 1342 ntBASIC16.7■□□□□ 0.26
TPM4P67936 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
TPM4P67936 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM4P67936 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM4P67936 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM4P67936 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.69■□□□□ 0.26
TPM4P67936 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.69■□□□□ 0.26
TPM4P67936 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 DGCR9-201ENST00000609630 2415 ntBASIC16.69■□□□□ 0.26
TPM4P67936 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM4P67936 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM4P67936 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TPM4P67936 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM4P67936 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.68■□□□□ 0.26
TPM4P67936 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC16.68■□□□□ 0.26
TPM4P67936 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPM4P67936 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPM4P67936 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TPM4P67936 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TPM4P67936 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM4P67936 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPM4P67936 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM4P67936 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms