Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHMP24386 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHMP24386 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 AC055811.4-201ENST00000624039 1754 ntBASIC13.94□□□□□ -0.18
CHMP24386 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHMP24386 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.93□□□□□ -0.18
CHMP24386 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 AC138969.2-201ENST00000532739 9932 ntBASIC13.93□□□□□ -0.18
CHMP24386 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.93□□□□□ -0.18
CHMP24386 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CHMP24386 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CHMP24386 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 BOLA2P3-201ENST00000404566 256 ntBASIC13.93□□□□□ -0.18
CHMP24386 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 KRT43P-201ENST00000434019 910 ntBASIC13.93□□□□□ -0.18
CHMP24386 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.93□□□□□ -0.18
CHMP24386 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.93□□□□□ -0.18
CHMP24386 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHMP24386 AC004066.1-201ENST00000502488 802 ntBASIC13.93□□□□□ -0.18
CHMP24386 TDH-203ENST00000531764 1110 ntBASIC13.93□□□□□ -0.18
CHMP24386 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.93□□□□□ -0.18
CHMP24386 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.93□□□□□ -0.18
CHMP24386 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 MIR5189-201ENST00000577370 114 ntBASIC13.93□□□□□ -0.18
CHMP24386 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 CLUHP6-201ENST00000580789 941 ntBASIC13.93□□□□□ -0.18
CHMP24386 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.93□□□□□ -0.18
CHMP24386 RPSAP52-203ENST00000622976 1023 ntBASIC13.93□□□□□ -0.18
CHMP24386 AC005252.2-201ENST00000624630 1141 ntBASIC13.93□□□□□ -0.18
CHMP24386 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.93□□□□□ -0.18
CHMP24386 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CHMP24386 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.93□□□□□ -0.18
CHMP24386 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CHMP24386 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CHMP24386 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CHMP24386 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.92□□□□□ -0.18
CHMP24386 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
CHMP24386 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CHMP24386 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms