Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TIMP1P01033 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMP1P01033 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMP1P01033 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TIMP1P01033 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.69■□□□□ 0.1
TIMP1P01033 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 IGHV1-12-201ENST00000518307 205 ntBASIC15.69■□□□□ 0.1
TIMP1P01033 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.69■□□□□ 0.1
TIMP1P01033 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 AC068831.5-201ENST00000557387 328 ntBASIC15.69■□□□□ 0.1
TIMP1P01033 TRMT112P3-201ENST00000580149 358 ntBASIC15.69■□□□□ 0.1
TIMP1P01033 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.69■□□□□ 0.1
TIMP1P01033 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 AL627230.2-201ENST00000613254 655 ntBASIC15.69■□□□□ 0.1
TIMP1P01033 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMP1P01033 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMP1P01033 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.69■□□□□ 0.1
TIMP1P01033 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMP1P01033 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.69■□□□□ 0.1
TIMP1P01033 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TIMP1P01033 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TIMP1P01033 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 PHB-210ENST00000511832 1509 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TIMP1P01033 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 PRORSD1P-202ENST00000563365 2154 ntBASIC15.68■□□□□ 0.1
TIMP1P01033 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.68■□□□□ 0.1
TIMP1P01033 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.68■□□□□ 0.1
TIMP1P01033 BPIFB5P-201ENST00000457066 1099 ntBASIC15.68■□□□□ 0.1
TIMP1P01033 ALG1L3P-201ENST00000503331 765 ntBASIC15.68■□□□□ 0.1
TIMP1P01033 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.68■□□□□ 0.1
TIMP1P01033 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.68■□□□□ 0.1
TIMP1P01033 KRT8P2-201ENST00000556193 944 ntBASIC15.68■□□□□ 0.1
TIMP1P01033 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 AC013553.1-201ENST00000560906 267 ntBASIC15.68■□□□□ 0.1
TIMP1P01033 SNORD3B-1-201ENST00000577988 758 ntBASIC15.68■□□□□ 0.1
TIMP1P01033 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TIMP1P01033 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
TIMP1P01033 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TIMP1P01033 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.68■□□□□ 0.1
TIMP1P01033 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms