Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH4O75427 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.41■□□□□ 0.06
LRCH4O75427 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH4O75427 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH4O75427 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH4O75427 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LRCH4O75427 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.41■□□□□ 0.06
LRCH4O75427 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
LRCH4O75427 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRCH4O75427 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH4O75427 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH4O75427 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.4■□□□□ 0.06
LRCH4O75427 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH4O75427 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LRCH4O75427 KRT43P-201ENST00000434019 910 ntBASIC15.4■□□□□ 0.06
LRCH4O75427 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.4■□□□□ 0.06
LRCH4O75427 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.4■□□□□ 0.06
LRCH4O75427 KRT17P7-201ENST00000451704 1104 ntBASIC15.4■□□□□ 0.06
LRCH4O75427 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.4■□□□□ 0.06
LRCH4O75427 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.4■□□□□ 0.06
LRCH4O75427 COX5BP1-201ENST00000507622 393 ntBASIC15.4■□□□□ 0.06
LRCH4O75427 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.4■□□□□ 0.06
LRCH4O75427 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH4O75427 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.4■□□□□ 0.06
LRCH4O75427 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.4■□□□□ 0.06
LRCH4O75427 CR383656.12-201ENST00000549567 513 ntBASIC15.4■□□□□ 0.06
LRCH4O75427 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.4■□□□□ 0.06
LRCH4O75427 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.4■□□□□ 0.06
LRCH4O75427 RN7SL713P-201ENST00000582127 302 ntBASIC15.4■□□□□ 0.06
LRCH4O75427 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.4■□□□□ 0.06
LRCH4O75427 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.4■□□□□ 0.06
LRCH4O75427 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.4■□□□□ 0.06
LRCH4O75427 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
LRCH4O75427 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 OR2I1P-210ENST00000642037 4691 ntBASIC15.4■□□□□ 0.06
LRCH4O75427 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 AC016397.2-201ENST00000624848 1985 ntBASIC15.4■□□□□ 0.06
LRCH4O75427 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
LRCH4O75427 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRCH4O75427 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH4O75427 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.39■□□□□ 0.05
LRCH4O75427 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.39■□□□□ 0.05
LRCH4O75427 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRCH4O75427 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 CROCCP4-201ENST00000457096 498 ntBASIC15.39■□□□□ 0.05
LRCH4O75427 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.39■□□□□ 0.05
LRCH4O75427 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.39■□□□□ 0.05
LRCH4O75427 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.39■□□□□ 0.05
LRCH4O75427 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.39■□□□□ 0.05
LRCH4O75427 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.39■□□□□ 0.05
LRCH4O75427 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.39■□□□□ 0.05
LRCH4O75427 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRCH4O75427 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.39■□□□□ 0.05
LRCH4O75427 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
LRCH4O75427 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH4O75427 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH4O75427 NFIC-211ENST00000641145 8399 ntBASIC15.39■□□□□ 0.05
LRCH4O75427 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.38■□□□□ 0.05
LRCH4O75427 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCH4O75427 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LRCH4O75427 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LRCH4O75427 KRT8P28-201ENST00000433288 1390 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms