RNA–Protein interactions for RNA: ENST00000372541.1

SNX21-203, Transcript of sorting nexin family member 21, humanhuman

TSL 2 BASIC

Gene SNX21, Length 771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-203ENST00000372541 NISCHQ9Y2I1 1504 aa36.27■■■■□ 3.4
SNX21-203ENST00000372541 ABCC9O60706 1549 aa32.29■■■□□ 2.76
SNX21-203ENST00000372541 CCDC180Q9P1Z9 1646 aa32.24■■■□□ 2.75
SNX21-203ENST00000372541 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
SNX21-203ENST00000372541 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
SNX21-203ENST00000372541 NACADO15069 1562 aa30.28■■■□□ 2.44
SNX21-203ENST00000372541 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
SNX21-203ENST00000372541 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
SNX21-203ENST00000372541 MYO15BQ96JP2 1530 aa30.13■■■□□ 2.41
SNX21-203ENST00000372541 PABPN1Q86U42 306 aaKnown RBP eCLIP30.06■■■□□ 2.4
SNX21-203ENST00000372541 DCAF1Q9Y4B6 1507 aa30.02■■■□□ 2.4
SNX21-203ENST00000372541 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
SNX21-203ENST00000372541 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
SNX21-203ENST00000372541 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
SNX21-203ENST00000372541 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
SNX21-203ENST00000372541 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
SNX21-203ENST00000372541 CC2D2AQ9P2K1 1620 aa29.12■■■□□ 2.25
SNX21-203ENST00000372541 EIF4G1Q04637 1599 aaKnown RBP28.97■■■□□ 2.23
SNX21-203ENST00000372541 DNAJC5Q9H3Z4 198 aa28.56■■■□□ 2.16
SNX21-203ENST00000372541 BAZ1AQ9NRL2 1556 aaPredicted RBP28.14■■■□□ 2.1
SNX21-203ENST00000372541 SMARCA4P51532 1647 aa28.14■■■□□ 2.09
SNX21-203ENST00000372541 CUX2O14529 1486 aa28.02■■■□□ 2.08
SNX21-203ENST00000372541 NCAPD3P42695 1498 aa28■■■□□ 2.07
SNX21-203ENST00000372541 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.07
SNX21-203ENST00000372541 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
SNX21-203ENST00000372541 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
SNX21-203ENST00000372541 ERCC6Q03468 1493 aa27.88■■■□□ 2.05
SNX21-203ENST00000372541 PEG3Q9GZU2 1588 aa27.86■■■□□ 2.05
SNX21-203ENST00000372541 HMGXB3Q12766 1538 aa27.83■■■□□ 2.05
SNX21-203ENST00000372541 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.04
SNX21-203ENST00000372541 RSF1Q96T23 1441 aaPredicted RBP27.65■■■□□ 2.02
SNX21-203ENST00000372541 WIZO95785 1651 aa27.64■■■□□ 2.02
SNX21-203ENST00000372541 NESP48681 1621 aa27.63■■■□□ 2.01
SNX21-203ENST00000372541 TOP2AP11388 1531 aaKnown RBP27.4■■□□□ 1.98
SNX21-203ENST00000372541 THOC2Q8NI27 1593 aaKnown RBP27.39■■□□□ 1.97
SNX21-203ENST00000372541 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
SNX21-203ENST00000372541 PDS5BQ9NTI5 1447 aa27.25■■□□□ 1.95
SNX21-203ENST00000372541 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
SNX21-203ENST00000372541 CADPSQ9ULU8 1353 aa27.12■■□□□ 1.93
SNX21-203ENST00000372541 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
SNX21-203ENST00000372541 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
SNX21-203ENST00000372541 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
SNX21-203ENST00000372541 SUPT5HO00267 1087 aaKnown RBP27■■□□□ 1.91
SNX21-203ENST00000372541 CFTRP13569 1480 aa26.98■■□□□ 1.91
SNX21-203ENST00000372541 WDR62O43379 1518 aa26.95■■□□□ 1.91
SNX21-203ENST00000372541 FANCD2Q9BXW9 1451 aa26.83■■□□□ 1.89
SNX21-203ENST00000372541 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
SNX21-203ENST00000372541 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
SNX21-203ENST00000372541 OSCARQ8IYS5 282 aa26.72■■□□□ 1.87
SNX21-203ENST00000372541 URB2Q14146 1524 aaKnown RBP26.58■■□□□ 1.85
SNX21-203ENST00000372541 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
SNX21-203ENST00000372541 TOPBP1Q92547 1522 aa26.39■■□□□ 1.82
SNX21-203ENST00000372541 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
SNX21-203ENST00000372541 IFT140Q96RY7 1462 aa26.32■■□□□ 1.8
SNX21-203ENST00000372541 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
SNX21-203ENST00000372541 RIMBP3CA6NJZ7 1639 aa26.31■■□□□ 1.8
SNX21-203ENST00000372541 RIMBP3BA6NNM3 1639 aa26.31■■□□□ 1.8
SNX21-203ENST00000372541 RIMBP3Q9UFD9 1639 aa26.31■■□□□ 1.8
SNX21-203ENST00000372541 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
SNX21-203ENST00000372541 CUX1P39880 1505 aa26.22■■□□□ 1.79
SNX21-203ENST00000372541 POLA1P09884 1462 aaPredicted RBP26.18■■□□□ 1.78
SNX21-203ENST00000372541 FGD5Q6ZNL6 1462 aa26.14■■□□□ 1.78
SNX21-203ENST00000372541 CYB5RLQ6IPT4 315 aa26.11■■□□□ 1.77
SNX21-203ENST00000372541 WRNQ14191 1432 aaPredicted RBP eCLIP26.1■■□□□ 1.77
SNX21-203ENST00000372541 TARBP1Q13395 1621 aaKnown RBP26.1■■□□□ 1.77
SNX21-203ENST00000372541 EIF4G3O43432 1585 aaKnown RBP26.07■■□□□ 1.76
SNX21-203ENST00000372541 SOGA1O94964 1423 aa26.05■■□□□ 1.76
SNX21-203ENST00000372541 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
SNX21-203ENST00000372541 AQRO60306 1485 aaKnown RBP eCLIP26.04■■□□□ 1.76
SNX21-203ENST00000372541 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
SNX21-203ENST00000372541 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
SNX21-203ENST00000372541 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
SNX21-203ENST00000372541 ARAP1Q96P48 1450 aa25.95■■□□□ 1.74
SNX21-203ENST00000372541 FBLN2P98095 1184 aa25.94■■□□□ 1.74
SNX21-203ENST00000372541 WDR97A6NE52 1622 aa25.93■■□□□ 1.74
SNX21-203ENST00000372541 TRHP20396 242 aaPredicted RBP25.92■■□□□ 1.74
SNX21-203ENST00000372541 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
SNX21-203ENST00000372541 CHD1O14646 1710 aa25.9■■□□□ 1.74
SNX21-203ENST00000372541 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
SNX21-203ENST00000372541 ABCA5Q8WWZ7 1642 aa25.78■■□□□ 1.72
SNX21-203ENST00000372541 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
SNX21-203ENST00000372541 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
SNX21-203ENST00000372541 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
SNX21-203ENST00000372541 PBRM1Q86U86 1689 aa25.72■■□□□ 1.71
SNX21-203ENST00000372541 CHMP7Q8WUX9 453 aaPredicted RBP25.71■■□□□ 1.71
SNX21-203ENST00000372541 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
SNX21-203ENST00000372541 MAGI1Q96QZ7 1491 aaPredicted RBP25.71■■□□□ 1.71
SNX21-203ENST00000372541 SYNJ2O15056 1496 aa25.6■■□□□ 1.69
SNX21-203ENST00000372541 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.69
SNX21-203ENST00000372541 KIF27Q86VH2 1401 aa25.55■■□□□ 1.68
SNX21-203ENST00000372541 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
SNX21-203ENST00000372541 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
SNX21-203ENST00000372541 AEBP2Q6ZN18 517 aaPredicted RBP25.45■■□□□ 1.66
SNX21-203ENST00000372541 GRIN2AQ12879 1464 aa25.45■■□□□ 1.66
SNX21-203ENST00000372541 IGF1RP08069 1367 aa25.39■■□□□ 1.65
SNX21-203ENST00000372541 CUL7Q14999 1698 aa25.38■■□□□ 1.65
SNX21-203ENST00000372541 NUP160Q12769 1436 aa25.31■■□□□ 1.64
SNX21-203ENST00000372541 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
SNX21-203ENST00000372541 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
SNX21-203ENST00000372541 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms