Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRIM54Q9BYV2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 AC117489.1-201ENST00000625169 3217 ntBASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 BAATP1-201ENST00000412284 1225 ntBASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 AC007969.1-201ENST00000433675 447 ntBASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRIM54Q9BYV2 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
TRIM54Q9BYV2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 AC134312.5-201ENST00000568031 1313 ntBASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 TLE1P1-201ENST00000422965 589 ntBASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 EIF3FP3-201ENST00000434851 1086 ntBASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 HMGN1P19-201ENST00000436976 333 ntBASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 AC026434.2-201ENST00000506094 1078 ntBASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM54Q9BYV2 TDH-203ENST00000531764 1110 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms