Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC10.8□□□□□ -0.68
VAMP8Q9BV40 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 AP003097.1-201ENST00000530657 1135 ntBASIC10.79□□□□□ -0.68
VAMP8Q9BV40 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 AL512604.3-201ENST00000569583 964 ntBASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
VAMP8Q9BV40 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 RN7SL832P-201ENST00000607781 1756 ntBASIC10.78□□□□□ -0.68
VAMP8Q9BV40 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 PAWRP1-201ENST00000451083 565 ntBASIC10.78□□□□□ -0.68
VAMP8Q9BV40 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC10.78□□□□□ -0.68
VAMP8Q9BV40 AC087163.2-201ENST00000457299 853 ntBASIC10.78□□□□□ -0.68
VAMP8Q9BV40 AC107956.1-201ENST00000494359 873 ntBASIC10.78□□□□□ -0.68
VAMP8Q9BV40 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms