RNA–Protein interactions for RNA: ENST00000330794.8

TMEM173-201, Transcript of transmembrane protein 173, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM173, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-201ENST00000330794 NISCHQ9Y2I1 1504 aa30.54■■■□□ 2.48
TMEM173-201ENST00000330794 ABCC9O60706 1549 aa26.5■■□□□ 1.83
TMEM173-201ENST00000330794 CCDC180Q9P1Z9 1646 aa26.34■■□□□ 1.81
TMEM173-201ENST00000330794 ZCCHC6Q5VYS8 1495 aaKnown RBP25.76■■□□□ 1.71
TMEM173-201ENST00000330794 DNAJC5BQ9UF47 199 aa25.49■■□□□ 1.67
TMEM173-201ENST00000330794 DCAF1Q9Y4B6 1507 aa25.28■■□□□ 1.64
TMEM173-201ENST00000330794 SHROOM4Q9ULL8 1493 aa25.27■■□□□ 1.64
TMEM173-201ENST00000330794 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
TMEM173-201ENST00000330794 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
TMEM173-201ENST00000330794 MYO15BQ96JP2 1530 aa24.78■■□□□ 1.56
TMEM173-201ENST00000330794 NACADO15069 1562 aa24.73■■□□□ 1.55
TMEM173-201ENST00000330794 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
TMEM173-201ENST00000330794 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
TMEM173-201ENST00000330794 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
TMEM173-201ENST00000330794 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
TMEM173-201ENST00000330794 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
TMEM173-201ENST00000330794 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
TMEM173-201ENST00000330794 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
TMEM173-201ENST00000330794 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
TMEM173-201ENST00000330794 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
TMEM173-201ENST00000330794 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
TMEM173-201ENST00000330794 EIF4G1Q04637 1599 aaKnown RBP23.75■■□□□ 1.39
TMEM173-201ENST00000330794 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
TMEM173-201ENST00000330794 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
TMEM173-201ENST00000330794 WIZO95785 1651 aa23.41■■□□□ 1.34
TMEM173-201ENST00000330794 CUX2O14529 1486 aa23.35■■□□□ 1.33
TMEM173-201ENST00000330794 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
TMEM173-201ENST00000330794 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
TMEM173-201ENST00000330794 TRIM41Q8WV44 630 aa23.14■■□□□ 1.29
TMEM173-201ENST00000330794 PEG3Q9GZU2 1588 aa23.06■■□□□ 1.28
TMEM173-201ENST00000330794 CCDC88BA6NC98 1476 aa23■■□□□ 1.27
TMEM173-201ENST00000330794 SMARCA2P51531 1590 aa23■■□□□ 1.27
TMEM173-201ENST00000330794 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
TMEM173-201ENST00000330794 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
TMEM173-201ENST00000330794 ATAD2BQ9ULI0 1458 aa22.84■■□□□ 1.25
TMEM173-201ENST00000330794 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
TMEM173-201ENST00000330794 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
TMEM173-201ENST00000330794 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
TMEM173-201ENST00000330794 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
TMEM173-201ENST00000330794 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
TMEM173-201ENST00000330794 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
TMEM173-201ENST00000330794 NESP48681 1621 aa22.52■■□□□ 1.19
TMEM173-201ENST00000330794 EEA1Q15075 1411 aa22.51■■□□□ 1.19
TMEM173-201ENST00000330794 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
TMEM173-201ENST00000330794 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
TMEM173-201ENST00000330794 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
TMEM173-201ENST00000330794 TRIM26Q12899 539 aaPredicted RBP22.4■■□□□ 1.18
TMEM173-201ENST00000330794 SOGA1O94964 1423 aa22.37■■□□□ 1.17
TMEM173-201ENST00000330794 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
TMEM173-201ENST00000330794 HRCP23327 699 aa22.33■■□□□ 1.16
TMEM173-201ENST00000330794 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
TMEM173-201ENST00000330794 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
TMEM173-201ENST00000330794 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
TMEM173-201ENST00000330794 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
TMEM173-201ENST00000330794 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
TMEM173-201ENST00000330794 RUSC2Q8N2Y8 1516 aa22.23■■□□□ 1.15
TMEM173-201ENST00000330794 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
TMEM173-201ENST00000330794 CFTRP13569 1480 aa22.22■■□□□ 1.15
TMEM173-201ENST00000330794 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
TMEM173-201ENST00000330794 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
TMEM173-201ENST00000330794 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.13
TMEM173-201ENST00000330794 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
TMEM173-201ENST00000330794 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
TMEM173-201ENST00000330794 KIF21BO75037 1637 aa22.12■■□□□ 1.13
TMEM173-201ENST00000330794 WDR62O43379 1518 aa22.12■■□□□ 1.13
TMEM173-201ENST00000330794 UBTFP17480 764 aaKnown RBP22.07■■□□□ 1.12
TMEM173-201ENST00000330794 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
TMEM173-201ENST00000330794 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
TMEM173-201ENST00000330794 CADPSQ9ULU8 1353 aa22.04■■□□□ 1.12
TMEM173-201ENST00000330794 CUX1P39880 1505 aa22.03■■□□□ 1.12
TMEM173-201ENST00000330794 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
TMEM173-201ENST00000330794 RAPGEF2Q9Y4G8 1499 aa21.89■■□□□ 1.1
TMEM173-201ENST00000330794 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
TMEM173-201ENST00000330794 PRXQ9BXM0 1461 aa21.87■■□□□ 1.09
TMEM173-201ENST00000330794 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
TMEM173-201ENST00000330794 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
TMEM173-201ENST00000330794 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
TMEM173-201ENST00000330794 CLIP1P30622 1438 aa21.85■■□□□ 1.09
TMEM173-201ENST00000330794 ZEB1P37275 1124 aaPredicted RBP21.84■■□□□ 1.09
TMEM173-201ENST00000330794 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
TMEM173-201ENST00000330794 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
TMEM173-201ENST00000330794 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
TMEM173-201ENST00000330794 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
TMEM173-201ENST00000330794 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
TMEM173-201ENST00000330794 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
TMEM173-201ENST00000330794 IGF1RP08069 1367 aa21.64■■□□□ 1.05
TMEM173-201ENST00000330794 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
TMEM173-201ENST00000330794 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
TMEM173-201ENST00000330794 APLP2Q06481 763 aa21.57■■□□□ 1.04
TMEM173-201ENST00000330794 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
TMEM173-201ENST00000330794 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
TMEM173-201ENST00000330794 ARAP1Q96P48 1450 aa21.54■■□□□ 1.04
TMEM173-201ENST00000330794 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
TMEM173-201ENST00000330794 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.04
TMEM173-201ENST00000330794 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
TMEM173-201ENST00000330794 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
TMEM173-201ENST00000330794 TRHP20396 242 aaPredicted RBP21.49■■□□□ 1.03
TMEM173-201ENST00000330794 RANGAP1P46060 587 aaPredicted RBP21.49■■□□□ 1.03
TMEM173-201ENST00000330794 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
TMEM173-201ENST00000330794 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms