Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 AC018442.1-201ENST00000421439 2061 ntBASIC14.53□□□□□ -0.08
PRPF18Q99633 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PRPF18Q99633 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.53□□□□□ -0.08
PRPF18Q99633 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PRPF18Q99633 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PRPF18Q99633 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PRPF18Q99633 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.52□□□□□ -0.08
PRPF18Q99633 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.52□□□□□ -0.08
PRPF18Q99633 AC018529.2-202ENST00000611482 3087 ntBASIC14.52□□□□□ -0.08
PRPF18Q99633 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRPF18Q99633 AL731571.1-201ENST00000617058 5428 ntBASIC14.52□□□□□ -0.08
PRPF18Q99633 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRPF18Q99633 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.52□□□□□ -0.08
PRPF18Q99633 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRPF18Q99633 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PRPF18Q99633 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PRPF18Q99633 AL360270.3-201ENST00000609118 1348 ntBASIC14.52□□□□□ -0.08
PRPF18Q99633 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.52□□□□□ -0.09
PRPF18Q99633 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.52□□□□□ -0.09
PRPF18Q99633 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PRPF18Q99633 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.52□□□□□ -0.09
PRPF18Q99633 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.52□□□□□ -0.09
PRPF18Q99633 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.52□□□□□ -0.09
PRPF18Q99633 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.52□□□□□ -0.09
PRPF18Q99633 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PRPF18Q99633 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.52□□□□□ -0.09
PRPF18Q99633 AL139385.1-201ENST00000611744 3272 ntBASIC14.52□□□□□ -0.09
PRPF18Q99633 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.52□□□□□ -0.09
PRPF18Q99633 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PRPF18Q99633 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PRPF18Q99633 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 DMBT1P1-203ENST00000636837 4628 ntBASIC14.51□□□□□ -0.09
PRPF18Q99633 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PRPF18Q99633 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PRPF18Q99633 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.51□□□□□ -0.09
PRPF18Q99633 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.51□□□□□ -0.09
PRPF18Q99633 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PRPF18Q99633 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.51□□□□□ -0.09
PRPF18Q99633 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PRPF18Q99633 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PRPF18Q99633 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.51□□□□□ -0.09
PRPF18Q99633 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.51□□□□□ -0.09
PRPF18Q99633 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PRPF18Q99633 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PRPF18Q99633 AL645937.2-201ENST00000396808 931 ntBASIC14.51□□□□□ -0.09
PRPF18Q99633 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
PRPF18Q99633 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.51□□□□□ -0.09
PRPF18Q99633 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.51□□□□□ -0.09
PRPF18Q99633 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.51□□□□□ -0.09
PRPF18Q99633 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.51□□□□□ -0.09
PRPF18Q99633 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms