Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.57■□□□□ 0.08
SHKBP1Q8TBC3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AC091046.1-201ENST00000331871 207 ntBASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 KLF2P1-201ENST00000447438 1042 ntBASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AC024681.1-201ENST00000521917 487 ntBASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 FGFR3P5-201ENST00000564496 886 ntBASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 RN7SL190P-201ENST00000582519 257 ntBASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 AC132192.2-201ENST00000596206 1147 ntBASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHKBP1Q8TBC3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 AC003102.2-201ENST00000589195 1469 ntBASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 NUP210P1-202ENST00000504322 710 ntBASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHKBP1Q8TBC3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms