Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 INGX-202ENST00000489074 768 ntBASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 MIR6074-201ENST00000612054 107 ntBASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 BX539320.1-201ENST00000623759 877 ntBASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
CLDN22Q8N7P3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SERBP1P5-201ENST00000510079 1181 ntBASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 AC015818.8-201ENST00000587907 1519 ntBASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 KRT8P24-201ENST00000560290 1559 ntBASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 AL356585.2-201ENST00000625078 2396 ntBASIC13.57□□□□□ -0.24
CLDN22Q8N7P3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms