Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
DHFRP00374 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.94□□□□□ -0.34
DHFRP00374 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
DHFRP00374 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 MED15P5-201ENST00000423150 992 ntBASIC12.94□□□□□ -0.34
DHFRP00374 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.94□□□□□ -0.34
DHFRP00374 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 PRYP6-201ENST00000514804 343 ntBASIC12.94□□□□□ -0.34
DHFRP00374 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.94□□□□□ -0.34
DHFRP00374 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 HNRNPUP1-201ENST00000554987 333 ntBASIC12.94□□□□□ -0.34
DHFRP00374 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.94□□□□□ -0.34
DHFRP00374 AC068137.2-201ENST00000605408 478 ntBASIC12.94□□□□□ -0.34
DHFRP00374 AC120114.3-201ENST00000611923 658 ntBASIC12.94□□□□□ -0.34
DHFRP00374 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 FAM197Y3-203ENST00000618346 717 ntBASIC12.94□□□□□ -0.34
DHFRP00374 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.94□□□□□ -0.34
DHFRP00374 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.94□□□□□ -0.34
DHFRP00374 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.94□□□□□ -0.34
DHFRP00374 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.94□□□□□ -0.34
DHFRP00374 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DHFRP00374 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DHFRP00374 REXO1L4P-201ENST00000605109 1937 ntBASIC12.94□□□□□ -0.34
DHFRP00374 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DHFRP00374 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.93□□□□□ -0.34
DHFRP00374 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DHFRP00374 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.93□□□□□ -0.34
DHFRP00374 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
DHFRP00374 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
DHFRP00374 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
DHFRP00374 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.93□□□□□ -0.34
DHFRP00374 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.93□□□□□ -0.34
DHFRP00374 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 AC092474.2-201ENST00000424288 719 ntBASIC12.93□□□□□ -0.34
DHFRP00374 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 RPS8P6-201ENST00000426177 609 ntBASIC12.93□□□□□ -0.34
DHFRP00374 AC007967.2-201ENST00000432613 625 ntBASIC12.93□□□□□ -0.34
DHFRP00374 AC074386.1-202ENST00000463561 864 ntBASIC12.93□□□□□ -0.34
DHFRP00374 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.93□□□□□ -0.34
DHFRP00374 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.93□□□□□ -0.34
DHFRP00374 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 KRT19P2-202ENST00000557173 1012 ntBASIC12.93□□□□□ -0.34
DHFRP00374 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.93□□□□□ -0.34
DHFRP00374 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.93□□□□□ -0.34
DHFRP00374 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.93□□□□□ -0.34
DHFRP00374 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.93□□□□□ -0.34
DHFRP00374 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.93□□□□□ -0.34
DHFRP00374 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DHFRP00374 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms