Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 AC009474.1-201ENST00000455096 1565 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC9.88□□□□□ -0.83
LITAFQ99732 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 AC106818.1-201ENST00000623223 3242 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 IMPDH1P4-201ENST00000445028 1534 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 PTMS-202ENST00000389462 773 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
LITAFQ99732 TFAMP1-201ENST00000412727 736 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 KRT18P67-201ENST00000432816 1264 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 FAM197Y8-203ENST00000450145 560 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC9.88□□□□□ -0.83
LITAFQ99732 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC9.88□□□□□ -0.83
LITAFQ99732 AC074386.1-202ENST00000463561 864 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 AF186996.4-201ENST00000467186 377 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC9.88□□□□□ -0.83
LITAFQ99732 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC9.88□□□□□ -0.83
LITAFQ99732 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC9.88□□□□□ -0.83
LITAFQ99732 TOLLIP-AS1-201ENST00000530897 939 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 RARRES2P9-201ENST00000565168 469 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC9.88□□□□□ -0.83
LITAFQ99732 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
LITAFQ99732 LINC01711-201ENST00000598340 967 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 AC148477.8-201ENST00000624298 468 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 AL358472.4-201ENST00000633140 710 ntBASIC9.88□□□□□ -0.83
LITAFQ99732 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
LITAFQ99732 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LITAFQ99732 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
LITAFQ99732 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
LITAFQ99732 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LITAFQ99732 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LITAFQ99732 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
LITAFQ99732 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
LITAFQ99732 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
LITAFQ99732 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms