Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AGAP14-201ENST00000624701 2060 ntBASIC15.67■□□□□ 0.1
USP46P62068 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.67■□□□□ 0.1
USP46P62068 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
USP46P62068 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
USP46P62068 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.67■□□□□ 0.1
USP46P62068 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.67■□□□□ 0.1
USP46P62068 AL354877.1-201ENST00000424412 413 ntBASIC15.67■□□□□ 0.1
USP46P62068 KRT8P13-201ENST00000463294 1010 ntBASIC15.67■□□□□ 0.1
USP46P62068 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.67■□□□□ 0.1
USP46P62068 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.67■□□□□ 0.1
USP46P62068 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.67■□□□□ 0.1
USP46P62068 AP001258.2-201ENST00000529891 490 ntBASIC15.67■□□□□ 0.1
USP46P62068 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.67■□□□□ 0.1
USP46P62068 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
USP46P62068 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.67■□□□□ 0.1
USP46P62068 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.67■□□□□ 0.1
USP46P62068 AL136301.1-201ENST00000615830 422 ntBASIC15.67■□□□□ 0.1
USP46P62068 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.67■□□□□ 0.1
USP46P62068 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.67■□□□□ 0.1
USP46P62068 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
USP46P62068 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.67■□□□□ 0.1
USP46P62068 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
USP46P62068 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.67■□□□□ 0.1
USP46P62068 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.66■□□□□ 0.1
USP46P62068 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
USP46P62068 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.66■□□□□ 0.1
USP46P62068 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 AC005089.1-201ENST00000619486 2241 ntBASIC15.66■□□□□ 0.1
USP46P62068 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
USP46P62068 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 AC004898.1-201ENST00000451057 766 ntBASIC15.66■□□□□ 0.1
USP46P62068 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.66■□□□□ 0.1
USP46P62068 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.66■□□□□ 0.1
USP46P62068 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.66■□□□□ 0.1
USP46P62068 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.66■□□□□ 0.1
USP46P62068 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.66■□□□□ 0.1
USP46P62068 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.66■□□□□ 0.1
USP46P62068 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 SALL4P5-201ENST00000419001 1760 ntBASIC15.66■□□□□ 0.1
USP46P62068 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.66■□□□□ 0.1
USP46P62068 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.66■□□□□ 0.1
USP46P62068 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
USP46P62068 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
USP46P62068 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms