Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.74■□□□□ 0.27
TPM3P06753 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.74■□□□□ 0.27
TPM3P06753 SPDYE7P-202ENST00000420373 878 ntBASIC16.74■□□□□ 0.27
TPM3P06753 SPDYE14P-201ENST00000442619 822 ntBASIC16.74■□□□□ 0.27
TPM3P06753 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TPM3P06753 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.74■□□□□ 0.27
TPM3P06753 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.74■□□□□ 0.27
TPM3P06753 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 AC026150.2-201ENST00000564693 1156 ntBASIC16.74■□□□□ 0.27
TPM3P06753 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
TPM3P06753 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.74■□□□□ 0.27
TPM3P06753 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 AC074044.1-201ENST00000609673 707 ntBASIC16.74■□□□□ 0.27
TPM3P06753 MIR6080-201ENST00000617359 66 ntBASIC16.74■□□□□ 0.27
TPM3P06753 AL513210.1-201ENST00000629608 234 ntBASIC16.74■□□□□ 0.27
TPM3P06753 AC114271.1-201ENST00000612689 2813 ntBASIC16.74■□□□□ 0.27
TPM3P06753 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.74■□□□□ 0.27
TPM3P06753 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.74■□□□□ 0.27
TPM3P06753 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TPM3P06753 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
TPM3P06753 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TPM3P06753 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.73■□□□□ 0.27
TPM3P06753 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
TPM3P06753 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.73■□□□□ 0.27
TPM3P06753 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.73■□□□□ 0.27
TPM3P06753 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 AF228730.6-201ENST00000641497 218 ntBASIC16.73■□□□□ 0.27
TPM3P06753 AC084121.3-201ENST00000641716 218 ntBASIC16.73■□□□□ 0.27
TPM3P06753 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.73■□□□□ 0.27
TPM3P06753 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.73■□□□□ 0.27
TPM3P06753 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 STRCP1-201ENST00000509801 5328 ntBASIC16.73■□□□□ 0.27
TPM3P06753 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TPM3P06753 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.73■□□□□ 0.27
TPM3P06753 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.72■□□□□ 0.27
TPM3P06753 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 FP325330.2-201ENST00000624219 5630 ntBASIC16.72■□□□□ 0.27
TPM3P06753 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC16.72■□□□□ 0.27
TPM3P06753 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TPM3P06753 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TPM3P06753 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TPM3P06753 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TPM3P06753 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms