Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NICN1Q9BSH3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
NICN1Q9BSH3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
NICN1Q9BSH3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NICN1Q9BSH3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.83□□□□□ -0.35
NICN1Q9BSH3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
NICN1Q9BSH3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.83□□□□□ -0.35
NICN1Q9BSH3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 KRT8P14-201ENST00000414254 1442 ntBASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 AC125807.1-201ENST00000483097 614 ntBASIC12.83□□□□□ -0.36
NICN1Q9BSH3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.83□□□□□ -0.36
NICN1Q9BSH3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 CLK3P2-201ENST00000427566 1453 ntBASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 AC016397.2-201ENST00000624848 1985 ntBASIC12.83□□□□□ -0.36
NICN1Q9BSH3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TUBB3P1-201ENST00000405796 1332 ntBASIC12.83□□□□□ -0.36
NICN1Q9BSH3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 AC087499.5-201ENST00000452760 1342 ntBASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.83□□□□□ -0.36
NICN1Q9BSH3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.82□□□□□ -0.36
NICN1Q9BSH3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms