Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 SLED1-202ENST00000512051 380 ntBASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 TIMM17BP1-201ENST00000545713 516 ntBASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AL844908.2-201ENST00000609461 460 ntBASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AC022144.1-201ENST00000602255 1580 ntBASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 INGX-202ENST00000489074 768 ntBASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AC044860.1-202ENST00000559481 777 ntBASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AC005498.2-205ENST00000593218 784 ntBASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 BTBD7P1-201ENST00000447253 1453 ntBASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TMEM53Q6P2H8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM53Q6P2H8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TMEM53Q6P2H8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TMEM53Q6P2H8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms