Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 MIR661-201ENST00000384842 89 ntBASIC12.79□□□□□ -0.36
CCL1P22362 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
CCL1P22362 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL1P22362 FTLP10-202ENST00000505798 471 ntBASIC12.79□□□□□ -0.36
CCL1P22362 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL1P22362 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.79□□□□□ -0.36
CCL1P22362 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL1P22362 WASH4P-201ENST00000564273 1246 ntBASIC12.79□□□□□ -0.36
CCL1P22362 LINC02560-201ENST00000596379 459 ntBASIC12.79□□□□□ -0.36
CCL1P22362 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL1P22362 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 AL138709.1-201ENST00000614840 1693 ntBASIC12.79□□□□□ -0.36
CCL1P22362 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 CICP4-201ENST00000447359 2812 ntBASIC12.79□□□□□ -0.36
CCL1P22362 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL1P22362 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL1P22362 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.78□□□□□ -0.36
CCL1P22362 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.78□□□□□ -0.36
CCL1P22362 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL1P22362 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.78□□□□□ -0.36
CCL1P22362 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.78□□□□□ -0.36
CCL1P22362 AC145423.3-201ENST00000615987 467 ntBASIC12.78□□□□□ -0.36
CCL1P22362 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CCL1P22362 AL033527.5-201ENST00000641382 801 ntBASIC12.78□□□□□ -0.36
CCL1P22362 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL1P22362 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CCL1P22362 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL1P22362 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL1P22362 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
CCL1P22362 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CCL1P22362 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CCL1P22362 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.77□□□□□ -0.36
CCL1P22362 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
CCL1P22362 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CCL1P22362 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CCL1P22362 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 AC020910.5-201ENST00000623668 1865 ntBASIC12.77□□□□□ -0.37
CCL1P22362 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.77□□□□□ -0.37
CCL1P22362 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 RN7SKP175-201ENST00000408472 289 ntBASIC12.77□□□□□ -0.37
CCL1P22362 PIN1P1-201ENST00000412108 996 ntBASIC12.77□□□□□ -0.37
CCL1P22362 BAATP1-201ENST00000412284 1225 ntBASIC12.77□□□□□ -0.37
CCL1P22362 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.77□□□□□ -0.37
CCL1P22362 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 ACTG1P3-201ENST00000431775 1114 ntBASIC12.77□□□□□ -0.37
CCL1P22362 PUDPP3-201ENST00000445368 636 ntBASIC12.77□□□□□ -0.37
CCL1P22362 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CCL1P22362 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms