Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
MMP2P08253 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MMP2P08253 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.92□□□□□ -0.02
MMP2P08253 SHC1P1-201ENST00000425230 1745 ntBASIC14.92□□□□□ -0.02
MMP2P08253 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
MMP2P08253 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MMP2P08253 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP2P08253 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.91□□□□□ -0.02
MMP2P08253 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
MMP2P08253 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP2P08253 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP2P08253 AC015656.1-201ENST00000624209 3578 ntBASIC14.91□□□□□ -0.02
MMP2P08253 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
MMP2P08253 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 MIR326-201ENST00000362220 95 ntBASIC14.91□□□□□ -0.02
MMP2P08253 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.91□□□□□ -0.02
MMP2P08253 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.91□□□□□ -0.02
MMP2P08253 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.91□□□□□ -0.02
MMP2P08253 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
MMP2P08253 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.91□□□□□ -0.02
MMP2P08253 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP2P08253 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
MMP2P08253 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.91□□□□□ -0.02
MMP2P08253 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 E2F3P2-201ENST00000447755 1422 ntBASIC14.91□□□□□ -0.02
MMP2P08253 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
MMP2P08253 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MMP2P08253 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MMP2P08253 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.9□□□□□ -0.02
MMP2P08253 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.9□□□□□ -0.02
MMP2P08253 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 GK-202ENST00000378941 458 ntTSL 3 BASIC14.9□□□□□ -0.02
MMP2P08253 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.9□□□□□ -0.02
MMP2P08253 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.9□□□□□ -0.02
MMP2P08253 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.9□□□□□ -0.02
MMP2P08253 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.9□□□□□ -0.02
MMP2P08253 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.9□□□□□ -0.02
MMP2P08253 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 AC027601.3-201ENST00000622907 509 ntBASIC14.9□□□□□ -0.02
MMP2P08253 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
MMP2P08253 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
MMP2P08253 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
MMP2P08253 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.9□□□□□ -0.02
MMP2P08253 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
MMP2P08253 AC090505.1-201ENST00000430515 1834 ntBASIC14.89□□□□□ -0.03
MMP2P08253 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MMP2P08253 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.89□□□□□ -0.03
MMP2P08253 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms