Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 AC245100.3-201ENST00000441281 285 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 AC007551.1-201ENST00000457394 519 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 FTH1P14-201ENST00000482930 551 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 KRT17P8-201ENST00000540749 863 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 AC025279.2-201ENST00000569730 653 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 RN7SL48P-201ENST00000579283 293 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 ENPP7P14-201ENST00000621765 1040 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 AC005089.1-201ENST00000619486 2241 ntBASIC13.1□□□□□ -0.31
CDH20Q9HBT6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CDH20Q9HBT6 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AC026434.2-201ENST00000506094 1078 ntBASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AC106886.1-201ENST00000568660 600 ntBASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 AL162274.1-201ENST00000617191 1098 ntBASIC13.09□□□□□ -0.31
CDH20Q9HBT6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 DMBT1P1-203ENST00000636837 4628 ntBASIC13.09□□□□□ -0.31
CDH20Q9HBT6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDH20Q9HBT6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms