Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 AC103810.10-201ENST00000606504 343 ntBASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 AC133540.1-201ENST00000620845 1019 ntBASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 FRMPD2B-201ENST00000431305 1347 ntBASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 AC023024.2-201ENST00000623561 1993 ntBASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC007292.2-201ENST00000593524 1812 ntBASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 C18orf15-201ENST00000623680 2534 ntBASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 RPSAP31-201ENST00000416648 895 ntBASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC078991.1-201ENST00000437297 610 ntBASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC092171.5-201ENST00000608012 942 ntBASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC013726.1-201ENST00000563747 2285 ntBASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS3Q8IXF0 AC022532.1-201ENST00000624563 1728 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AC112693.3-201ENST00000624819 1983 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS3Q8IXF0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms