Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.8□□□□□ -0.2
PRKCDQ05655 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.8□□□□□ -0.2
PRKCDQ05655 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.8□□□□□ -0.2
PRKCDQ05655 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRKCDQ05655 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 AL158070.2-201ENST00000623713 1621 ntBASIC13.79□□□□□ -0.2
PRKCDQ05655 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 AL138799.1-201ENST00000448213 1675 ntBASIC13.79□□□□□ -0.2
PRKCDQ05655 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.79□□□□□ -0.2
PRKCDQ05655 FAM86LP-201ENST00000478302 853 ntBASIC13.79□□□□□ -0.2
PRKCDQ05655 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
PRKCDQ05655 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 SPDYE18-201ENST00000510091 1050 ntBASIC13.79□□□□□ -0.2
PRKCDQ05655 AC135586.1-201ENST00000539323 574 ntBASIC13.79□□□□□ -0.2
PRKCDQ05655 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 RARRES2P5-201ENST00000564013 466 ntBASIC13.79□□□□□ -0.2
PRKCDQ05655 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PRKCDQ05655 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.79□□□□□ -0.2
PRKCDQ05655 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.79□□□□□ -0.2
PRKCDQ05655 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRKCDQ05655 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.79□□□□□ -0.2
PRKCDQ05655 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 AL137783.1-201ENST00000623494 1896 ntBASIC13.78□□□□□ -0.2
PRKCDQ05655 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 AC015909.5-201ENST00000624336 2266 ntBASIC13.78□□□□□ -0.2
PRKCDQ05655 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCDQ05655 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.78□□□□□ -0.2
PRKCDQ05655 TPT1P11-201ENST00000458482 498 ntBASIC13.78□□□□□ -0.2
PRKCDQ05655 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCDQ05655 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.78□□□□□ -0.2
PRKCDQ05655 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.78□□□□□ -0.2
PRKCDQ05655 DUX4L27-201ENST00000554796 1261 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms