Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 AC018442.1-201ENST00000421439 2061 ntBASIC12.36□□□□□ -0.43
SNCAP37840 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.36□□□□□ -0.43
SNCAP37840 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SNCAP37840 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SNCAP37840 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SNCAP37840 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SNCAP37840 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SNCAP37840 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCAP37840 MIR574-201ENST00000385209 96 ntBASIC12.35□□□□□ -0.43
SNCAP37840 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.35□□□□□ -0.43
SNCAP37840 AL627223.1-201ENST00000416693 442 ntBASIC12.35□□□□□ -0.43
SNCAP37840 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.35□□□□□ -0.43
SNCAP37840 TARDBPP1-201ENST00000442013 1203 ntBASIC12.35□□□□□ -0.43
SNCAP37840 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCAP37840 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCAP37840 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCAP37840 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.35□□□□□ -0.43
SNCAP37840 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCAP37840 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.35□□□□□ -0.43
SNCAP37840 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCAP37840 AC004835.2-201ENST00000603762 682 ntBASIC12.35□□□□□ -0.43
SNCAP37840 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.35□□□□□ -0.43
SNCAP37840 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SNCAP37840 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.35□□□□□ -0.43
SNCAP37840 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
SNCAP37840 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SNCAP37840 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SNCAP37840 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
SNCAP37840 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
SNCAP37840 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SNCAP37840 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SNCAP37840 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SNCAP37840 AC019294.4-201ENST00000561777 2905 ntBASIC12.34□□□□□ -0.43
SNCAP37840 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms