Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AL450487.1-201ENST00000426799 995 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 RPL13P2-201ENST00000440687 659 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC004066.1-201ENST00000502488 802 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC025048.3-201ENST00000590609 569 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC007967.4-201ENST00000614700 386 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC005702.4-201ENST00000618393 416 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC027612.1-201ENST00000445234 2395 ntBASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV18A0A075B6X5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 TOMM22P5-201ENST00000416399 439 ntBASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 LINC01115-203ENST00000606068 577 ntBASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 FAM197Y3-203ENST00000618346 717 ntBASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 AL137783.1-201ENST00000623494 1896 ntBASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 TCAM1P-207ENST00000485295 1537 ntBASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV18A0A075B6X5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRAV18A0A075B6X5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.87□□□□□ -0.35
TRAV18A0A075B6X5 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms