Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 LINC00565-201ENST00000562710 2331 ntBASIC22.04■■□□□ 1.12
PCDHGB4Q9UN71 HLA-L-211ENST00000482052 1765 ntBASIC22.04■■□□□ 1.12
PCDHGB4Q9UN71 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB4Q9UN71 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB4Q9UN71 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGB4Q9UN71 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PCDHGB4Q9UN71 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 AL117328.2-201ENST00000624617 1940 ntBASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGB4Q9UN71 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 RPS2P7-201ENST00000447334 885 ntBASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 AL592293.1-201ENST00000502889 1188 ntBASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGB4Q9UN71 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGB4Q9UN71 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGB4Q9UN71 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB4Q9UN71 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGB4Q9UN71 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB4Q9UN71 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB4Q9UN71 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB4Q9UN71 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGB4Q9UN71 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGB4Q9UN71 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGB4Q9UN71 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 AL024507.2-201ENST00000606070 2574 ntBASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 MIR6765-201ENST00000614092 87 ntBASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGB4Q9UN71 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB4Q9UN71 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB4Q9UN71 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCDHGB4Q9UN71 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHGB4Q9UN71 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB4Q9UN71 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB4Q9UN71 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGB4Q9UN71 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 RARRES2P2-201ENST00000394842 485 ntBASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms