Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.7■□□□□ 0.9
CROCCP3Q8IVE0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.69■□□□□ 0.9
CROCCP3Q8IVE0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CROCCP3Q8IVE0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CROCCP3Q8IVE0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CROCCP3Q8IVE0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CROCCP3Q8IVE0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CROCCP3Q8IVE0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CROCCP3Q8IVE0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CROCCP3Q8IVE0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 DUX4L28-201ENST00000623687 678 ntBASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CROCCP3Q8IVE0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CROCCP3Q8IVE0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CROCCP3Q8IVE0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CROCCP3Q8IVE0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CROCCP3Q8IVE0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
CROCCP3Q8IVE0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CROCCP3Q8IVE0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CROCCP3Q8IVE0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CROCCP3Q8IVE0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CROCCP3Q8IVE0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CROCCP3Q8IVE0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CROCCP3Q8IVE0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CROCCP3Q8IVE0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CROCCP3Q8IVE0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 MIR3665-201ENST00000578708 105 ntBASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CROCCP3Q8IVE0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CROCCP3Q8IVE0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CROCCP3Q8IVE0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CROCCP3Q8IVE0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
CROCCP3Q8IVE0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
CROCCP3Q8IVE0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CROCCP3Q8IVE0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CROCCP3Q8IVE0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CROCCP3Q8IVE0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms