Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AL592295.1-201ENST00000400984 884 ntBASIC14.41□□□□□ -0.1
UBE2AP49459 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2AP49459 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2AP49459 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2AP49459 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2AP49459 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2AP49459 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2AP49459 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2AP49459 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBE2AP49459 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2AP49459 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBE2AP49459 AC087393.1-201ENST00000582896 145 ntBASIC14.4□□□□□ -0.1
UBE2AP49459 BHLHE23-202ENST00000612929 1109 ntBASIC14.4□□□□□ -0.1
UBE2AP49459 AC129492.7-201ENST00000622992 756 ntBASIC14.4□□□□□ -0.1
UBE2AP49459 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2AP49459 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
UBE2AP49459 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2AP49459 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBE2AP49459 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2AP49459 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2AP49459 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2AP49459 LINC00543-201ENST00000567234 1845 ntBASIC14.39□□□□□ -0.11
UBE2AP49459 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2AP49459 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBE2AP49459 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC14.39□□□□□ -0.11
UBE2AP49459 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2AP49459 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBE2AP49459 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UBE2AP49459 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBE2AP49459 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UBE2AP49459 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 KRT18P60-201ENST00000312876 1297 ntBASIC14.38□□□□□ -0.11
UBE2AP49459 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2AP49459 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2AP49459 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 NTF6A-201ENST00000591175 560 ntBASIC14.38□□□□□ -0.11
UBE2AP49459 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.38□□□□□ -0.11
UBE2AP49459 TMEM202-AS1-202ENST00000565181 2325 ntBASIC14.38□□□□□ -0.11
UBE2AP49459 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.38□□□□□ -0.11
UBE2AP49459 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBE2AP49459 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2AP49459 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
UBE2AP49459 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.37□□□□□ -0.11
UBE2AP49459 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2AP49459 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2AP49459 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2AP49459 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2AP49459 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC14.37□□□□□ -0.11
UBE2AP49459 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2AP49459 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
UBE2AP49459 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC14.37□□□□□ -0.11
UBE2AP49459 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBE2AP49459 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
UBE2AP49459 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC14.37□□□□□ -0.11
UBE2AP49459 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2AP49459 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBE2AP49459 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBE2AP49459 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2AP49459 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
UBE2AP49459 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBE2AP49459 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2AP49459 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2AP49459 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.36□□□□□ -0.11
UBE2AP49459 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2AP49459 DUX4L18-201ENST00000553347 1267 ntBASIC14.36□□□□□ -0.11
UBE2AP49459 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2AP49459 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC14.36□□□□□ -0.11
UBE2AP49459 HLA-L-211ENST00000482052 1765 ntBASIC14.36□□□□□ -0.11
UBE2AP49459 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2AP49459 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBE2AP49459 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC14.35□□□□□ -0.11
UBE2AP49459 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.35□□□□□ -0.11
UBE2AP49459 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBE2AP49459 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.35□□□□□ -0.11
UBE2AP49459 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBE2AP49459 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms