Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNAB3O43448 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNAB3O43448 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNAB3O43448 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
KCNAB3O43448 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNAB3O43448 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNAB3O43448 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNAB3O43448 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.27■□□□□ 0.68
KCNAB3O43448 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNAB3O43448 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNAB3O43448 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNAB3O43448 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNAB3O43448 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNAB3O43448 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNAB3O43448 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNAB3O43448 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNAB3O43448 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
KCNAB3O43448 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNAB3O43448 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KCNAB3O43448 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNAB3O43448 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
KCNAB3O43448 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNAB3O43448 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KCNAB3O43448 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KCNAB3O43448 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.25■□□□□ 0.67
KCNAB3O43448 BHLHE23-202ENST00000612929 1109 ntBASIC19.25■□□□□ 0.67
KCNAB3O43448 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNAB3O43448 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNAB3O43448 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNAB3O43448 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNAB3O43448 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNAB3O43448 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNAB3O43448 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
KCNAB3O43448 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNAB3O43448 AC026202.3-201ENST00000600805 1127 ntBASIC19.24■□□□□ 0.67
KCNAB3O43448 AC133552.2-201ENST00000619106 1032 ntBASIC19.24■□□□□ 0.67
KCNAB3O43448 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
KCNAB3O43448 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNAB3O43448 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KCNAB3O43448 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNAB3O43448 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNAB3O43448 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNAB3O43448 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
KCNAB3O43448 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNAB3O43448 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNAB3O43448 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNAB3O43448 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNAB3O43448 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNAB3O43448 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.22■□□□□ 0.67
KCNAB3O43448 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNAB3O43448 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNAB3O43448 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KCNAB3O43448 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNAB3O43448 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
KCNAB3O43448 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KCNAB3O43448 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNAB3O43448 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
KCNAB3O43448 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.21■□□□□ 0.67
KCNAB3O43448 AC009831.1-201ENST00000580420 1582 ntBASIC19.21■□□□□ 0.67
KCNAB3O43448 RAP2CP1-202ENST00000605179 643 ntBASIC19.21■□□□□ 0.67
KCNAB3O43448 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNAB3O43448 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KCNAB3O43448 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNAB3O43448 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.2■□□□□ 0.66
KCNAB3O43448 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.2■□□□□ 0.66
KCNAB3O43448 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 AC233723.2-201ENST00000623798 2106 ntBASIC19.2■□□□□ 0.66
KCNAB3O43448 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KCNAB3O43448 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KCNAB3O43448 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
KCNAB3O43448 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.19■□□□□ 0.66
KCNAB3O43448 YBX1P4-201ENST00000392794 808 ntBASIC19.19■□□□□ 0.66
KCNAB3O43448 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KCNAB3O43448 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.18■□□□□ 0.66
KCNAB3O43448 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms