Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.23■□□□□ 0.99
KPNA4O00629 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.22■□□□□ 0.99
KPNA4O00629 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA4O00629 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA4O00629 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA4O00629 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA4O00629 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA4O00629 RPS2P7-201ENST00000447334 885 ntBASIC21.22■□□□□ 0.99
KPNA4O00629 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
KPNA4O00629 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.22■□□□□ 0.99
KPNA4O00629 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KPNA4O00629 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KPNA4O00629 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KPNA4O00629 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA4O00629 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KPNA4O00629 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
KPNA4O00629 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA4O00629 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.21■□□□□ 0.99
KPNA4O00629 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA4O00629 DUX4L9-201ENST00000449051 1259 ntBASIC21.21■□□□□ 0.99
KPNA4O00629 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KPNA4O00629 ABCB10P4-201ENST00000566803 2184 ntBASIC21.21■□□□□ 0.99
KPNA4O00629 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.21■□□□□ 0.99
KPNA4O00629 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.21■□□□□ 0.99
KPNA4O00629 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KPNA4O00629 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA4O00629 LINC00565-201ENST00000562710 2331 ntBASIC21.21■□□□□ 0.99
KPNA4O00629 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KPNA4O00629 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KPNA4O00629 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA4O00629 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
KPNA4O00629 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA4O00629 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.2■□□□□ 0.98
KPNA4O00629 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.2■□□□□ 0.98
KPNA4O00629 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA4O00629 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA4O00629 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA4O00629 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KPNA4O00629 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
KPNA4O00629 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA4O00629 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA4O00629 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.19■□□□□ 0.98
KPNA4O00629 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA4O00629 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.19■□□□□ 0.98
KPNA4O00629 U85056.1-201ENST00000616429 682 ntBASIC21.19■□□□□ 0.98
KPNA4O00629 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA4O00629 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
KPNA4O00629 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA4O00629 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
KPNA4O00629 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.19■□□□□ 0.98
KPNA4O00629 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
KPNA4O00629 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA4O00629 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.18■□□□□ 0.98
KPNA4O00629 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.18■□□□□ 0.98
KPNA4O00629 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.18■□□□□ 0.98
KPNA4O00629 MIR6765-201ENST00000614092 87 ntBASIC21.18■□□□□ 0.98
KPNA4O00629 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA4O00629 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KPNA4O00629 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA4O00629 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
KPNA4O00629 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KPNA4O00629 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.18■□□□□ 0.98
KPNA4O00629 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.18■□□□□ 0.98
KPNA4O00629 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KPNA4O00629 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KPNA4O00629 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KPNA4O00629 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.17■□□□□ 0.98
KPNA4O00629 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KPNA4O00629 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
KPNA4O00629 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KPNA4O00629 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KPNA4O00629 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.17■□□□□ 0.98
KPNA4O00629 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KPNA4O00629 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
KPNA4O00629 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.17■□□□□ 0.98
KPNA4O00629 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
KPNA4O00629 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
KPNA4O00629 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KPNA4O00629 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.16■□□□□ 0.98
KPNA4O00629 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.16■□□□□ 0.98
KPNA4O00629 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.16■□□□□ 0.98
KPNA4O00629 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KPNA4O00629 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.16■□□□□ 0.98
KPNA4O00629 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KPNA4O00629 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.16■□□□□ 0.98
KPNA4O00629 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KPNA4O00629 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KPNA4O00629 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KPNA4O00629 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.15■□□□□ 0.98
KPNA4O00629 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.15■□□□□ 0.98
KPNA4O00629 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KPNA4O00629 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KPNA4O00629 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
KPNA4O00629 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
KPNA4O00629 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.15■□□□□ 0.98
KPNA4O00629 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.15■□□□□ 0.98
KPNA4O00629 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KPNA4O00629 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KPNA4O00629 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
KPNA4O00629 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms