Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TRAV2A0A0B4J234 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 AL451085.2-201ENST00000605085 799 ntBASIC17.21■□□□□ 0.35
TRAV2A0A0B4J234 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.21■□□□□ 0.34
TRAV2A0A0B4J234 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 AC009299.2-201ENST00000482477 511 ntBASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV2A0A0B4J234 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 SNX5-217ENST00000606557 1087 ntBASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV2A0A0B4J234 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV2A0A0B4J234 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 MIR6722-201ENST00000617286 78 ntBASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV2A0A0B4J234 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 AC092028.1-203ENST00000608262 953 ntBASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV2A0A0B4J234 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV2A0A0B4J234 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms