Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
IGHV3-43A0A0B4J1X8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGHV3-43A0A0B4J1X8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
IGHV3-43A0A0B4J1X8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IGHV3-43A0A0B4J1X8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 THA1P-201ENST00000590384 1145 ntBASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGHV3-43A0A0B4J1X8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 AL022069.1-201ENST00000568025 1636 ntBASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGHV3-43A0A0B4J1X8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGHV3-43A0A0B4J1X8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 AC131274.2-201ENST00000580697 1507 ntBASIC18.9■□□□□ 0.62
IGHV3-43A0A0B4J1X8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 MIR4281-201ENST00000580852 62 ntBASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGHV3-43A0A0B4J1X8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGHV3-43A0A0B4J1X8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 KRT18P24-201ENST00000344739 1156 ntBASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.87■□□□□ 0.61
IGHV3-43A0A0B4J1X8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms