Protein–RNA interactions for Protein: A0A075B6S6

IGKV2D-30, Immunoglobulin kappa variable 2D-30, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-30A0A075B6S6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
IGKV2D-30A0A075B6S6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IGKV2D-30A0A075B6S6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC12.52□□□□□ -0.4
IGKV2D-30A0A075B6S6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IGKV2D-30A0A075B6S6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC12.52□□□□□ -0.4
IGKV2D-30A0A075B6S6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC12.52□□□□□ -0.4
IGKV2D-30A0A075B6S6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
IGKV2D-30A0A075B6S6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 LINC01971-201ENST00000617888 1048 ntBASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 AC004812.2-201ENST00000611079 2094 ntBASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
IGKV2D-30A0A075B6S6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 AC126177.7-201ENST00000547904 679 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L13-201ENST00000554103 1267 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L15-201ENST00000611059 1267 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L23-201ENST00000615195 1269 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L24-201ENST00000617576 1269 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L22-201ENST00000618238 1269 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L20-201ENST00000619712 1269 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L21-201ENST00000622058 1269 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L10-201ENST00000622460 1267 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DUX4L25-201ENST00000624915 1269 ntBASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
IGKV2D-30A0A075B6S6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
IGKV2D-30A0A075B6S6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 C9orf163-202ENST00000624034 2573 ntBASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
IGKV2D-30A0A075B6S6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms