Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC138649.4-201ENST00000612222 287 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AC106028.4-201ENST00000614509 607 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AC093512.1-201ENST00000617969 520 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 CICP8-201ENST00000455800 2813 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AP001267.2-201ENST00000532619 2086 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AC131212.3-201ENST00000624087 4219 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AL137783.1-201ENST00000623494 1896 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 AL158070.2-201ENST00000623713 1621 ntBASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC50Q8IVM0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 GAPDHP40-201ENST00000505218 1006 ntBASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 AL391069.4-201ENST00000609583 481 ntBASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 DRD5P1-201ENST00000456605 1438 ntBASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC50Q8IVM0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 AC004890.2-204ENST00000481968 304 ntBASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 TPRX2P-201ENST00000535362 881 ntBASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 RARRES2P5-201ENST00000564013 466 ntBASIC15.84■□□□□ 0.13
CCDC50Q8IVM0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms