Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 AC055811.4-201ENST00000624039 1754 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SPCS3P61009 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 AC004066.1-201ENST00000502488 802 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 POLD2P1-201ENST00000511220 997 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 AC074044.1-201ENST00000609673 707 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 AP001059.3-201ENST00000619053 235 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.25□□□□□ -0.45
SPCS3P61009 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 AC152010.1-201ENST00000415779 2006 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 DMBT1P1-203ENST00000636837 4628 ntBASIC12.25□□□□□ -0.45
SPCS3P61009 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SPCS3P61009 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC12.25□□□□□ -0.45
SPCS3P61009 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SPCS3P61009 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.24□□□□□ -0.45
SPCS3P61009 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.24□□□□□ -0.45
SPCS3P61009 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SPCS3P61009 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.24□□□□□ -0.45
SPCS3P61009 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.24□□□□□ -0.45
SPCS3P61009 YBX1P5-201ENST00000509441 847 ntBASIC12.24□□□□□ -0.45
SPCS3P61009 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.24□□□□□ -0.45
SPCS3P61009 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms