Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC42P60953 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 C8orf49-201ENST00000525043 1968 ntBASIC13.71□□□□□ -0.21
CDC42P60953 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.71□□□□□ -0.21
CDC42P60953 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.71□□□□□ -0.21
CDC42P60953 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 MKNK2P1-201ENST00000437526 628 ntBASIC13.71□□□□□ -0.21
CDC42P60953 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
CDC42P60953 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.71□□□□□ -0.21
CDC42P60953 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.71□□□□□ -0.21
CDC42P60953 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.71□□□□□ -0.21
CDC42P60953 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
CDC42P60953 AL589739.1-201ENST00000607720 493 ntBASIC13.71□□□□□ -0.21
CDC42P60953 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.71□□□□□ -0.21
CDC42P60953 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CDC42P60953 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.71□□□□□ -0.21
CDC42P60953 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 STRCP1-201ENST00000509801 5328 ntBASIC13.71□□□□□ -0.22
CDC42P60953 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.71□□□□□ -0.22
CDC42P60953 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.71□□□□□ -0.22
CDC42P60953 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CDC42P60953 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 SLC25A1P1-201ENST00000528351 927 ntBASIC13.7□□□□□ -0.22
CDC42P60953 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.7□□□□□ -0.22
CDC42P60953 AC026150.2-201ENST00000564693 1156 ntBASIC13.7□□□□□ -0.22
CDC42P60953 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.7□□□□□ -0.22
CDC42P60953 LINC01115-203ENST00000606068 577 ntBASIC13.7□□□□□ -0.22
CDC42P60953 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CDC42P60953 CETN4P-206ENST00000642099 2168 ntBASIC13.7□□□□□ -0.22
CDC42P60953 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CDC42P60953 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.7□□□□□ -0.22
CDC42P60953 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms