Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
KRT6CP48668 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 KRT8P22-201ENST00000562317 1415 ntBASIC14.55□□□□□ -0.08
KRT6CP48668 AC015802.1-201ENST00000588104 1449 ntBASIC14.55□□□□□ -0.08
KRT6CP48668 AC097359.2-201ENST00000604992 2389 ntBASIC14.55□□□□□ -0.08
KRT6CP48668 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.55□□□□□ -0.08
KRT6CP48668 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.55□□□□□ -0.08
KRT6CP48668 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
KRT6CP48668 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
KRT6CP48668 AC055811.4-201ENST00000624039 1754 ntBASIC14.55□□□□□ -0.08
KRT6CP48668 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
KRT6CP48668 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT6CP48668 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT6CP48668 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6CP48668 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 PMS2P2-201ENST00000425039 1128 ntBASIC14.54□□□□□ -0.08
KRT6CP48668 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT6CP48668 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6CP48668 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6CP48668 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT6CP48668 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6CP48668 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6CP48668 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.54□□□□□ -0.08
KRT6CP48668 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 MIR8072-201ENST00000614241 80 ntBASIC14.54□□□□□ -0.08
KRT6CP48668 AL391825.1-201ENST00000457671 1364 ntBASIC14.54□□□□□ -0.08
KRT6CP48668 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT6CP48668 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 AP001267.2-201ENST00000532619 2086 ntBASIC14.54□□□□□ -0.08
KRT6CP48668 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT6CP48668 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
KRT6CP48668 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
KRT6CP48668 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KRT6CP48668 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT6CP48668 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT6CP48668 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.53□□□□□ -0.08
KRT6CP48668 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KRT6CP48668 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT6CP48668 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT6CP48668 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT6CP48668 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
KRT6CP48668 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms