Protein–RNA interactions for Protein: P42677

RPS27, 40S ribosomal protein S27, humanhuman

Known RBP Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27P42677 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.31□□□□□ -0.28
RPS27P42677 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPS27P42677 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPS27P42677 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RPS27P42677 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.31□□□□□ -0.28
RPS27P42677 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPS27P42677 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPS27P42677 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RPS27P42677 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 AC012617.1-204ENST00000586340 2305 ntBASIC13.3□□□□□ -0.28
RPS27P42677 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RPS27P42677 AL645937.2-201ENST00000396808 931 ntBASIC13.3□□□□□ -0.28
RPS27P42677 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.3□□□□□ -0.28
RPS27P42677 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.3□□□□□ -0.28
RPS27P42677 CYMP-203ENST00000474680 1263 ntBASIC13.3□□□□□ -0.28
RPS27P42677 RPL13AP25-201ENST00000484130 612 ntBASIC13.3□□□□□ -0.28
RPS27P42677 INGX-202ENST00000489074 768 ntBASIC13.3□□□□□ -0.28
RPS27P42677 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
RPS27P42677 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.3□□□□□ -0.28
RPS27P42677 AC055876.2-201ENST00000531834 546 ntBASIC13.3□□□□□ -0.28
RPS27P42677 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.3□□□□□ -0.28
RPS27P42677 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.3□□□□□ -0.28
RPS27P42677 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 AC055811.4-201ENST00000624039 1754 ntBASIC13.3□□□□□ -0.28
RPS27P42677 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RPS27P42677 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPS27P42677 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.3□□□□□ -0.28
RPS27P42677 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.29□□□□□ -0.28
RPS27P42677 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.29□□□□□ -0.28
RPS27P42677 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RPS27P42677 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.29□□□□□ -0.28
RPS27P42677 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.29□□□□□ -0.28
RPS27P42677 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.29□□□□□ -0.28
RPS27P42677 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.29□□□□□ -0.28
RPS27P42677 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RPS27P42677 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPS27P42677 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms