Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.58□□□□□ -0.4
ABCA1O95477 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
ABCA1O95477 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 PDIA3P2-201ENST00000428073 158 ntBASIC12.58□□□□□ -0.4
ABCA1O95477 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.58□□□□□ -0.4
ABCA1O95477 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.58□□□□□ -0.4
ABCA1O95477 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.58□□□□□ -0.4
ABCA1O95477 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 KRT8P14-201ENST00000414254 1442 ntBASIC12.58□□□□□ -0.4
ABCA1O95477 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ABCA1O95477 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.58□□□□□ -0.4
ABCA1O95477 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ABCA1O95477 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 AC008132.1-202ENST00000342005 1389 ntBASIC12.58□□□□□ -0.4
ABCA1O95477 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.58□□□□□ -0.4
ABCA1O95477 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 AL008707.1-201ENST00000422498 534 ntBASIC12.58□□□□□ -0.4
ABCA1O95477 AL353637.1-201ENST00000451571 732 ntBASIC12.58□□□□□ -0.4
ABCA1O95477 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ABCA1O95477 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.58□□□□□ -0.4
ABCA1O95477 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 IQSEC3P1-201ENST00000538799 536 ntBASIC12.58□□□□□ -0.4
ABCA1O95477 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
ABCA1O95477 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ABCA1O95477 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 AC011270.2-201ENST00000624293 2550 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 KRT8P4-201ENST00000509735 1454 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.57□□□□□ -0.4
ABCA1O95477 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 AC012618.1-201ENST00000461223 412 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.57□□□□□ -0.4
ABCA1O95477 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 IMP3P2-201ENST00000489760 475 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.57□□□□□ -0.4
ABCA1O95477 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
ABCA1O95477 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 AC068587.8-201ENST00000641239 219 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.57□□□□□ -0.4
ABCA1O95477 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ABCA1O95477 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 AL158070.2-201ENST00000623713 1621 ntBASIC12.57□□□□□ -0.4
ABCA1O95477 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.57□□□□□ -0.4
ABCA1O95477 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms