Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 AC211429.1-201ENST00000415277 523 ntBASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 AC008735.5-201ENST00000623544 497 ntBASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 AC110048.1-201ENST00000604293 2157 ntBASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CROCCP3Q8IVE0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CROCCP3Q8IVE0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.58□□□□□ -0.23
CROCCP3Q8IVE0 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CROCCP3Q8IVE0 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CROCCP3Q8IVE0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CROCCP3Q8IVE0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CROCCP3Q8IVE0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 AC105339.3-201ENST00000560043 636 ntBASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 REXO1L6P-202ENST00000619970 1078 ntBASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 AL161645.1-201ENST00000622716 1255 ntBASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 AP000550.4-202ENST00000639755 178 ntBASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 AC020910.6-201ENST00000623084 1459 ntBASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CROCCP3Q8IVE0 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms