Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRC28Q86X40 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRC28Q86X40 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 AC007787.1-201ENST00000588095 1583 ntBASIC13.38□□□□□ -0.27
LRRC28Q86X40 AL607033.1-201ENST00000623900 1599 ntBASIC13.38□□□□□ -0.27
LRRC28Q86X40 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 HIST3H2BA-201ENST00000436555 524 ntBASIC13.38□□□□□ -0.27
LRRC28Q86X40 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 SERBP1P5-201ENST00000510079 1181 ntBASIC13.38□□□□□ -0.27
LRRC28Q86X40 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 AC135586.1-201ENST00000539323 574 ntBASIC13.38□□□□□ -0.27
LRRC28Q86X40 AC044860.1-202ENST00000559481 777 ntBASIC13.38□□□□□ -0.27
LRRC28Q86X40 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRC28Q86X40 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRC28Q86X40 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AC114501.2-201ENST00000439631 535 ntBASIC13.37□□□□□ -0.27
LRRC28Q86X40 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.37□□□□□ -0.27
LRRC28Q86X40 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 AC105206.1-202ENST00000314927 2368 ntBASIC13.37□□□□□ -0.27
LRRC28Q86X40 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms