Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AC136759.1-202ENST00000530858 2194 ntBASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AC139712.1-201ENST00000378256 1875 ntBASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 AC020910.5-201ENST00000623668 1865 ntBASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDLIM5Q96HC4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 KHSRPP1-201ENST00000427983 1768 ntBASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 USP32P1-208ENST00000506594 1164 ntBASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AL391280.1-201ENST00000506969 1062 ntBASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AC106820.3-201ENST00000561653 397 ntBASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AL358472.5-202ENST00000641448 1267 ntBASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 MYO15B-237ENST00000642007 4893 ntBASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDLIM5Q96HC4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 AC015688.4-201ENST00000580780 1647 ntBASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.55□□□□□ -0.08
PDLIM5Q96HC4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms