Protein–RNA interactions for Protein: Q8NHY6

ZFP28, Zinc finger protein 28 homolog, humanhuman

Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFP28Q8NHY6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZFP28Q8NHY6 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 MST1P2-201ENST00000457982 2291 ntBASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZFP28Q8NHY6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 AC022144.1-201ENST00000602255 1580 ntBASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 AC104457.1-201ENST00000401024 814 ntBASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 AC135586.1-201ENST00000539323 574 ntBASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 AL158212.4-201ENST00000624062 1286 ntBASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 AC138969.2-201ENST00000532739 9932 ntBASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.53□□□□□ -0.08
ZFP28Q8NHY6 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms