Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC139530.3-201ENST00000620344 690 ntBASIC14.02□□□□□ -0.17
CDH12P55289 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH12P55289 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH12P55289 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDH12P55289 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH12P55289 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDH12P55289 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH12P55289 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 AC138969.2-201ENST00000532739 9932 ntBASIC14.02□□□□□ -0.17
CDH12P55289 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH12P55289 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CDH12P55289 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CDH12P55289 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDH12P55289 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.02□□□□□ -0.17
CDH12P55289 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.02□□□□□ -0.17
CDH12P55289 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH12P55289 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH12P55289 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 AC018665.1-201ENST00000622927 1362 ntBASIC14.01□□□□□ -0.17
CDH12P55289 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDH12P55289 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH12P55289 AL589987.1-201ENST00000453380 819 ntBASIC14.01□□□□□ -0.17
CDH12P55289 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH12P55289 SPDYE18-201ENST00000510091 1050 ntBASIC14.01□□□□□ -0.17
CDH12P55289 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.01□□□□□ -0.17
CDH12P55289 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
CDH12P55289 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.01□□□□□ -0.17
CDH12P55289 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.01□□□□□ -0.17
CDH12P55289 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.01□□□□□ -0.17
CDH12P55289 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.01□□□□□ -0.17
CDH12P55289 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDH12P55289 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CDH12P55289 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDH12P55289 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CDH12P55289 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14□□□□□ -0.17
CDH12P55289 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14□□□□□ -0.17
CDH12P55289 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms