Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PMS1P54277 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PMS1P54277 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PMS1P54277 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PMS1P54277 CLUHP2-201ENST00000426660 1303 ntBASIC16.45■□□□□ 0.22
PMS1P54277 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.45■□□□□ 0.22
PMS1P54277 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 AC067930.6-201ENST00000623257 4947 ntBASIC16.44■□□□□ 0.22
PMS1P54277 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PMS1P54277 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PMS1P54277 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 AC131206.1-201ENST00000538078 1211 ntBASIC16.44■□□□□ 0.22
PMS1P54277 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.44■□□□□ 0.22
PMS1P54277 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PMS1P54277 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PMS1P54277 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.44■□□□□ 0.22
PMS1P54277 AC092135.3-201ENST00000624151 1846 ntBASIC16.44■□□□□ 0.22
PMS1P54277 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 AC011840.2-201ENST00000563063 1520 ntBASIC16.44■□□□□ 0.22
PMS1P54277 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PMS1P54277 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PMS1P54277 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PMS1P54277 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PMS1P54277 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
PMS1P54277 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.43■□□□□ 0.22
PMS1P54277 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.43■□□□□ 0.22
PMS1P54277 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 POM121L8P-201ENST00000417732 1281 ntBASIC16.43■□□□□ 0.22
PMS1P54277 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.43■□□□□ 0.22
PMS1P54277 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 POM121L9P-203ENST00000441984 1285 ntBASIC16.43■□□□□ 0.22
PMS1P54277 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PMS1P54277 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.43■□□□□ 0.22
PMS1P54277 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 AC092364.2-202ENST00000597012 1073 ntBASIC16.43■□□□□ 0.22
PMS1P54277 AC145423.3-201ENST00000615987 467 ntBASIC16.43■□□□□ 0.22
PMS1P54277 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PMS1P54277 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PMS1P54277 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.43■□□□□ 0.22
PMS1P54277 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.43■□□□□ 0.22
PMS1P54277 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
PMS1P54277 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PMS1P54277 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PMS1P54277 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.42■□□□□ 0.22
PMS1P54277 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.42■□□□□ 0.22
PMS1P54277 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PMS1P54277 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms