Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.35□□□□□ -0.43
CLN5O75503 POLD2P1-201ENST00000511220 997 ntBASIC12.35□□□□□ -0.43
CLN5O75503 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.35□□□□□ -0.43
CLN5O75503 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.35□□□□□ -0.43
CLN5O75503 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CLN5O75503 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.35□□□□□ -0.43
CLN5O75503 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.35□□□□□ -0.43
CLN5O75503 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.35□□□□□ -0.43
CLN5O75503 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.35□□□□□ -0.43
CLN5O75503 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.35□□□□□ -0.43
CLN5O75503 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.35□□□□□ -0.43
CLN5O75503 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CLN5O75503 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.35□□□□□ -0.43
CLN5O75503 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
CLN5O75503 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CLN5O75503 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 AC027020.2-201ENST00000602585 2389 ntBASIC12.35□□□□□ -0.43
CLN5O75503 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CLN5O75503 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CLN5O75503 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CLN5O75503 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CLN5O75503 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 MIR574-201ENST00000385209 96 ntBASIC12.34□□□□□ -0.43
CLN5O75503 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.34□□□□□ -0.43
CLN5O75503 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.34□□□□□ -0.43
CLN5O75503 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.34□□□□□ -0.43
CLN5O75503 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.34□□□□□ -0.43
CLN5O75503 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.34□□□□□ -0.43
CLN5O75503 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CLN5O75503 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CLN5O75503 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.33□□□□□ -0.43
CLN5O75503 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CLN5O75503 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
CLN5O75503 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
CLN5O75503 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.33□□□□□ -0.43
CLN5O75503 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLN5O75503 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLN5O75503 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLN5O75503 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLN5O75503 ELL2P1-201ENST00000413990 1906 ntBASIC12.33□□□□□ -0.44
CLN5O75503 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.33□□□□□ -0.44
CLN5O75503 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CLN5O75503 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms